Items where Author is "McCarter, James P. "

Sahar, Abubuckar and Zarlenga, Dante S. and Martin, John and Yin, Yong and Wang, Zhengyuan and McCarter, James P. and Gasparree, Louis and Wilson, Richard K. and Mitreva, Makedonka (2009) The transcriptomes of the cattle parasitic nematode Ostertagia ostartagi. Veterinary Parasitology, 162 (1-2). pp. 89-99.

Yin, Yong and Martin, John and Abubucker, Sahar and Wang, Zhengyuan and Wyrwicz, Lucijan and Rychlewski, Leszek and McCarter, James P. and Wilson, Richard K. and Mitreva, Makedonka (2009) Molecular determinants archetypical to the phylum Nematoda. BMC Genomics. pp. 1-14.

Elling, Axel A. and Mitreva, Makedonka and Gai, Xiaowu and Martin, John and Recknor, Justin and Hussey, Richard S and Nettleton, Dan and McCarter, James P. and Baum, Thomas J. (2009) Sequence mining and transcript profiling to explore cyst nematode parasitism. Directory of Open Access Journals. pp. 1-17.

Yin, Yong and Martin, John and Abubucker, Sahar and Scott, Alan L. and McCarter, James P. and Wilson, Richard K. and Jasmer, Douglas P. and Mitreva, Makedonka (2008) Intestinal Transcriptomes of Nematodes: Comparison of the Parasites Ascarissuum and Haemonchuscontortus with the Free-living Caenorhabditiselegans. Plos Neglected tropical diseases (www.plosntds.org ) - Open Access, 2 (8). pp. 1-12.

Abubucker, Sahar and Martin, John and Yin, Yong and Fulton, Lucinda and Yang, Shiaw-Pyng and Hallsworth-Pepin, Kym and Johnston, J. Spencer and Hawdon, John and McCarter, James P. and Wilson, Richard K. and Mitreva, Makedonka (2008) The canine hookworm genome: analysis and classification of Ancylostoma caninum survey sequences. Mol Biochem Parasitol, 157 (2). pp. 187-192.

Wylie, Todd and Martin, John and Abubucker, Sahar and Yin, Yong and Messina, David and Wang, Zhengyuan and McCarter, James P. and Mitreva, Makedonka (2008) NemaPath: online exploration of KEGG-based metabolic pathways for nematodes. BMC Genomics, 9 (525). pp. 1-10.

Mitreva, Makedonka and Zarlenga, Dante S. and McCarter, James P. and Jasmer, Douglas P. (2007) Parasitic nematodes – from genomes to control. In: Veterinary Parasitology. Elsevier B.V., pp. 31-42.

Mitreva, Makedonka and Elling, Axel A. and Recknor, Justin and Gai, Xiaowu and John, Martin and Maier, Thomas R and McDermott, Jeffery P and Hewezi, Tarek and McK Bird, David and Davis, Eric L and Hussey, Richard S and Nettleton, Dan and McCarter, James P. and Baum, Thomas J. (2007) Divergent evolution of arrested development in the dauer stage of Caenorhabditis elegans and the infective stage of Heterodera glycines. Genome Biology, 8 (10). pp. 1-19.

Li, Ben-Wen and Rush, Amy C. and Weil, Gary J. and McCarter, James P. and Mitreva, Makedonka (2006) Brugia malayi: effects of radiation and culture on gene expression in infective larvae. In: Molecular Biochemical Parasitology. Elsevier B.V., pp. 201-207.

Mitreva, Makedonka and Wendl, Michael C and Martin, John and Wylie, Todd and Yin, Yong and Larson, Allan and Parkinson, John and Waterston, Robert H. and McCarter, James P. (2006) Codon usage patterns in Nematoda: analysis based on over 25 million codons in thirty-two species. Genome Biology, 7.

Yin, Yong and Martin, John and McCarter, James P. and Clifton, Sandra W. and Wilson, Richard K. and Mitreva, Makedonka (2006) Identification and analysis of genes expressed in the adult filarial parasitic nematode Dirofilaria immitis. International Journal for Parasitology, 36 (7). pp. 829-839.

Bird, David M. and Blaxter, Mark and McCarter, James P. and Mitreva, Makedonka and Sternberg, Paul W. and Thomas, W.Kelley (2005) A White Paper on Nematode Comparative Genomics. Journal of Nematology, 37 (4). pp. 408-416. ISSN 408-416

Mitreva, Makedonka and Blaxter, Mark and Bird, David M. and McCarter, James P. (2005) Comparative genomics of nematodes. Trends in Genetics, 22 (10). pp. 573-581.

Thompson, Fiona J. and Mitreva, Makedonka and Barker, Gary L.A. and Martin, John and Waterston, Robert H. and McCarter, James P. and Viney, Mark E. (2005) An expressed sequence tag analysis of the life-cycle of the parasitic nematode Strongyloides ratti. In: Molecular and Biochemical Parasitology. Elsever, pp. 32-46.

Mitreva, Makedonka and Appleton, Judith and McCarter, James P. and Jasmer, Douglas P. (2005) Expressed sequence tags from life cycle stages of Trichinella spiralis: Application to biology and parasite control. Veterinary parasitology, 137 (1-2). pp. 13-17.

Mitreva, Makedonka and McCarter, James P. and Arasu, Prema and Hawdon, John and Martin, John and Dante, Mike (2005) Investigating hookworm genomes by comparative analysis of two Ancylostoma species. BMC Genomics. pp. 1-19.

McCarter, James P. and Bird, David M. and Mitreva, Makedonka (2005) Nematode Gene Sequences: Update for December 2005. Journal of Nematology, 37 (4). pp. 417-421. ISSN 417–421

Jasmer, Douglas P. and Mitreva, Makedonka and McCarter, James P. (2004) mRNA sequences for Haemonchus contortus intestinal cathepsin B-like cysteine proteases display an extreme in abundance and diversity compared with other adult mammalian parasitic nematodes. Molecular and Biochemical Parasitology, 137 (2). pp. 297-305.

Mitreva, Makedonka and McCarter, James P. and Martin, John (2004) Comparative genomics of gene expression in the parasitic and free-living nematodes Strongyloides stercoralis and Caenorhabditis elegans. Genome Research. pp. 209-220.

Mitreva, Makedonka and Jasmer, Douglas P. and Appleton, Judith and Martin, John and Dante, Mike and Wylie, Todd and Clifton, Sandra W. and Waterston, Robert H. and McCarter, James P. (2004) Gene discovery in the adenophorean nematode Trichinella spiralis: an analysis of transcription from three life cycle stages. Molecular and Biochemical Parasitology, 137 (2). pp. 277-291.

Wylie, Todd and Martin, John and Dante, Michael and Mitreva, Makedonka and Clifton, Sandra W. and Chinwalla, Asif and Waterston, Robert H. and Wilson, Richard K. and McCarter, James P. (2004) Nematode.net: a tool for navigating sequences from parasitic and free-living nematodes. Nucleic Acids Research, 32. D423-D426.

Mitreva, Makedonka and Elling, Axel A. and Dante, Mike and Kloek, Andrew P and Kalyanaraman, A. and Aluru, S. and Clifton, Sandra W. and Bird, David M. and Baum, Thomas J. and McCarter, James P. (2004) A survey of SL1-spliced transcripts from the root-lesion nematode Pratylenchus penetrans. Mol Gen Genomics, 272 (2). pp. 138-148.

Parkinson, John and Mitreva, Makedonka and Hall, Neil and Blaxter, Mark and McCarter, James P. (2003) 400 000 nematode ESTs on the Net. Trends in Parasitology, 19. pp. 283-286.

McCarter, James P. and Mitreva, Makedonka and Martin, John and Dante, Mike and Wylie, Todd and Rao, Uma and Pape, Deana and Bowers, Yvette and Theising, Brenda and Murphy, Claire V and Kloek, Andrew P and Chiapelli, Brandi J and Clifton, Sandra W. and Bird, David M. and Waterston, Robert H. (2003) Analysis and functional classification of transcripts from the nematode Meloidogyne incognita. Genome Biology, 4 (4). R26.1-R26.19.