Fixing genomic data decompression errors

Stojanov, Done (2018) Fixing genomic data decompression errors. Balkan Journal of Applied Mathematics and Informatics, 1 (2). pp. 17-22. ISSN 2545-4803


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The problem of genomic data compression/decompression is considered. Unlike current research that depends on reference sequence or template, a new hash-based methodology that does not depended on reference sequence is proposed. By applying the hashing formula which was proposed by Reneker and Shyu, 9 bytes of compression gain per zipped read is possible. However the main emphasis in this paper is put on the correction on errors in genomic data decompression that happen if Renker-Shyu formula is applied.

Item Type: Article
Subjects: Natural sciences > Biological sciences
Natural sciences > Computer and information sciences
Divisions: Faculty of Computer Science
Depositing User: Done Stojanov
Date Deposited: 18 Dec 2018 11:01
Last Modified: 18 Dec 2018 11:01

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